GENOME: Pseudomonas syringae pv. tomato DC3000

Entry

T00118            Complete  Genome

Org code

pst

Name

Pseudomonas syringae pv. tomato DC3000

Category

Reference genome

Annotation

yes

Taxonomy

TAX:223283

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

Data source

GenBank (Assembly:GCA_000007805.1)
BioProject:359

Original DB

PPI

Keywords

Plant pathogen

Comment

Pathogenic on tomato and Arabidopsis thaliana.
Isolated in 1960 from tomato in the Channel Islands in Guernsey, United Kingdom.

Chromosome

Circular

Sequence

GB:AE016853

Length

6397126

Plasmid

pDC3000A; Circular

Sequence

GB:AE016855

Length

73661

Plasmid

pDC3000B; Circular

Sequence

GB:AE016854

Length

67473

Statistics

Number of nucleotides:       6538260
Number of protein genes:        5621
Number of RNA genes:             107

Created

2003

Reference

PMID:12928499

Authors

Buell CR, Joardar V, Lindeberg M, Selengut J, Paulsen IT, Gwinn ML, Dodson RJ, Deboy RT, Durkin AS, Kolonay JF, et al.

Title

The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000.

Journal

Proc Natl Acad Sci U S A 100:10181-6 (2003)
DOI:10.1073/pnas.1731982100

All links

Ontology (39)   
   KEGG BRITE (39)   
Pathway (331)   
   KEGG PATHWAY (126)   
   KEGG MODULE (205)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Genome (1)   
   ASSEMBLY (1)   
Gene (8548)   
   KEGG GENES (5844)   
   KEGG MGENES (1718)   
   RefGene (986)   
DNA sequence (3)   
   GenBank (3)   
Literature (1)   
   PubMed (1)   
Taxonomy (1)   
   TAX (1)   
All databases (8926)   

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